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Welcome to MitoMiner, an integrated web resource of mitochondrial proteomics for a wide range of organisms

If you are short of time, just navigate through our set of Feature Hints. For a more detailed description on how to use the site and its features try the Tutorials


FEATURES
TUTORIALS

Search

 

Enter a UniProt, KEGG, Enzyme Commission (EC), OMIM or other identifier [eg. P56480, R01900, 4.2.1.3, #125853].
Alternatively, search for a protein name, disease, or other keyword [eg. ATP synthase subunit gamma, Diabetes]

Upload and analyse lists of data

widget charts Explore and Analyse your own data. Upload your own list of identifiers or use our public mitochondrial proteome lists. These can then can analysed with our widgets and used in the template searches below.

 
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Upload list

Use template searches

Get started with powerful searches using our predefined Templates. These customizable templates have been designed around common tasks performed by our biologist community.

Use a mitochondrial proteome list

MitoMiner contains different reference sets of mitochondrial proteins that have been determined in different ways.

You can view and download these lists using the links below or use them directly in the template searches above. Read more

  • IMPI - ver Q3 2014 - Integrated Mitochondrial Protein Index (Human Mouse Rat and Cow)
    (6726 Proteins)

    The IMPI reference set was developed by using two machine learning techniques to combine the mass-spectrometry and GFP tagging data in MitoMiner with mitochondrial targeting sequence predictions and antibody localisation staining, to find proteins that have similar evidence and properties to characterised mitochondrial proteins.

  • MitoCarta Inventory (Human and Mouse Only)
    (2682 Proteins)

    This is a list of Human and Mouse mitochondrial proteins as defined by the MitoCarta Inventory of Mammalian Mitochondrial Genes (PubMed:18614015).

  • MitoMiner Reference Set (All Species)
    (12925 Proteins)

    This is a list of mitochondrial proteins covering all 12 species included in MitoMiner. These were defined as proteins (including orthologs) that have been identified in 3 or more independent mass-spec studies or at least 1 GFP tagging study, from the 49 studies in MitoMiner. MitoMiner Reference Sets for individual species can be found using the query on the Mito Reference tab above.

  • More lists

    Perl, Python, Ruby & Java API

    perl java python ruby

    You can fetch data directly from MitoMiner for your own programs via our Application Programming Interface (API) too! We provide client libraries in the following languages: